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eXist Native XML Database
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eXist Native XML Database
by Roberto Zicari, Awais Rashid, Akmal B. Chaudhri
XML Data Management: Native XML and XML-Enabled Database Systems
Copyright
Preface
Acknowledgments
What Is XML?
Information Modeling with XML
Introduction
XML as an Information Domain
How XML Expresses Information
Patterns in XML
Common XML Information-Modeling Pitfalls
A Very Simple Way to Design XML
Conclusion
Native XML Databases
Tamino—Software AG's Native XML Server
Introduction
Tamino Architecture and APIs
XML Storage
Querying XML
Tools
Full Database Functionality
Conclusion
eXist Native XML Database
Introduction
Features
System Architecture Overview
Getting Started
Query Language Extensions
Application Development
Technical Background
Conclusion
Embedded XML Databases
Introduction
A Primer on Embedded Databases
Embedded XML Databases
Building Applications for Embedded XML Databases
Conclusion
XML and Relational Databases
IBM XML-Enabled Data Management Product Architecture and Technology
Introduction
Product and Technology Offering Summaries
Current Architecture and Technology
Future Architecture and Technology
Conclusion
Notices
Supporting XML in Oracle9i
Introduction
Storing XML as CLOB
XMLType
Using XSU for Fine-Grained Storage
Building XML Documents from Relational Data
Web Access to the Database
Special Oracle Features
Conclusion
XML Support in Microsoft SQL Server 2000
Introduction
XML and Relational Data
XML Access to SQL Server
Serializing SQL Query Results into XML
Providing Relational Views over XML
SQLXML Templates
Providing XML Views over Relational Data
Conclusion
A Generic Architecture for Storing XML Documents in a Relational Database
Introduction
System Architecture
The Data Model
Creating the Database
Connecting to the Repository
Uploading XML Documents
Querying the Repository
Further Enhancements
Conclusion
An Object-Relational Approach to Building a High-Performance XML Repository
Introduction
Overview of XML Use-Case Scenario
High-Level System Architecture
Detailed Design Descriptions
Conclusion
Applications of XML
Knowledge Management in Bioinformatics
Introduction
A Brief Molecular Biology Background
Life Sciences Are Turning to XML to Model Their Information
A Genetic Information Model
NeoCore XMS*
Integration of BLAST into NeoCore XMS
Conclusion
Case Studies of XML Used with IBM DB2 Universal Database
Introduction
Case Study 1: “Our Most Valued Customers Come First”
Case Study 2: “Improve Cash Flow”
Conclusion
Notices
The Design and Implementation of an Engineering Data Management System Using XML and J2EE
Introduction
Background and Requirements
Overview
Design Choices
Future Directions
Conclusion
Geographical Data Interchange Using XML-Enabled Technology within the GIDB System
Introduction
GIDB METOC Data Integration
GIDB Web Map Service Implementation
GIDB GML Import and Export
Conclusion
Space Wide Web by Adapters in Distributed Systems Configuration from Reusable Components
Introduction
Advanced Concept Description: The Research Problem
Integration of Components with Architecture
Example
Future Generation NASA Institute for Advanced Concepts, Space Wide Web Research, and Boundaries
Advanced Concept Development
Conclusion
XML as a Unifying Framework for Inductive Databases
Introduction
Past Work
The Proposed Data Model: XDM
Benefits of XDM
Toward Flexible and Open Systems
Related Work
Conclusion
Designing and Managing an XML Warehouse
Introduction
Architecture
Data Warehouse Specification
Managing the Metadata
Storage and Management of the Data Warehouse
DAWAX: A Graphic Tool for the Specification and Management of a Data Warehouse
Related Work
Conclusion
Performance and Benchmarks
XML Management System Benchmarks
Introduction
Benchmark Specification
Benchmark Data Set
Existing Benchmarks for XML
Conclusion
The Michigan Benchmark: A Micro-Benchmark for XML Query Performance Diagnostics
Introduction
Related Work
Benchmark Data Set
Benchmark Queries
Using the Benchmark
Conclusion
A Comparison of Database Approaches for Storing XML Documents
Introduction
Data Models for XML Documents
Databases for Storing XML Documents
Benchmarking Specification
Test Results
Related Work
Summary
Performance Analysis between an XML-Enabled Database and a Native XML Database
Introduction
Related Work
Methodology
Database Design
Discussion
Experiment Result
Conclusion
Conclusion
References
Contributors
Editors
Chapter 1: Information Modeling with XML
Chapter 2: Tamino—Software AG's Native XML Server
Chapter 3: eXist Native XML Database
Chapter 4: Embedded XML Databases
Chapter 5: IBM XML-Enabled Data Management Product Architecture and Technology
Chapter 6: Supporting XML in Oracle9i
Chapter 7: XML Support in Microsoft SQL Server 2000
Chapter 8: A Generic Architecture for Storing XML Documents in a Relational Database
Chapter 9: An Object-Relational Approach to Building a High-Performance XML Repository
Chapter 10: Knowledge Management in Bioinformatics
Chapter 11: Case Studies of XML Used with IBM DB2 Universal Database
Chapter 12: The Design and Implementation of an Engineering Data Management System Using XML and J2EE
Chapter 13: Geographical Data Interchange Using XML-Enabled Technology within the GIDB System
Chapter 14: Space Wide Web by Adapters in Distributed Systems Configuration from Reusable Components
Chapter 15: XML as a Unifying Framework for Inductive Databases
Chapter 16: Designing and Managing an XML Warehouse
Chapter 17: XML Management System Benchmarks
Chapter 18: The Michigan Benchmark: A Micro-Benchmark for XML Query Performance Diagnostics
Chapter 19: A Comparison of Database Approaches for Storing XML Documents
Chapter 20: Performance Analysis between an XML-Enabled Database and a Native XML Database
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Chapter 3. eXist Native XML Database
Wolfgang M. Meier
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